Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015926909.1_cds_XP_016474840.1_66825
CDS Infomation

[gene=LOC107796560] [db_xref=GeneID:107796560] [protein=glutamate receptor 2.8-like] [protein_id=XP_016474840.1] [location=join(1176..1458,1630..2969,3108..3420,3506..3912,4019..4573)] [gbkey=CDS]
Sequence

ATGCAAAACCAAAGATGCCACTTCCTGATTCTTTTCATTCAGTTTGTCTCTATCATTAGC
TTTTGCTACCACATAATGCCAATAAGAGGTCAAGATGAAACTAATGTCATAAAGAAGGTA
GATGTAGGTATAATTCTTGATCTGGAAACAAATGTGGCAAAAGTAATGCACACATGCATA
TTGCTAGCTCTTGAAGATTACCATGCCGCTAATCGCAGTGCCATTAGGATAGTCCCTCAC
TTCAGAGATTCCAAGAAAGATGATGTTGAAGCAGCATCCGCAGCCATATACTTGCTAAAG
GATGTCAAAGTACAAGCTATCTTTGGGCCACAAATGTCTACACAAACTGATTTTGTGATT
GACATAGGGAACAAAGTAAAGGTTCCTGTCATTTCTCCAGCAACAAGTCCTTCACTTTCA
GTCAAGGAAAATCCCTACTTCATCAGAGCAGCACTTCCTTCTTCCAGCCAGACTAAAGCC
ATAGCAGCAATTGTTAAAAACTATGAGTGGAGGGAGGTTGTAATCATCTATGAGGATAGC
CCCTTTGGAACGGGGATAGTTCCACATTTGACTGATGCTTTACTGGAAATTAGCACTTTA
GTCTCCTATAGAAGTGTTATTTCTCCTTCAGCCAATGATGATCAAATCCTCAGGGAGCTA
TACAAGTTGAATACAATGCAGACGAGGGTGTTCATCGTGCACTTGCAGTCATTTCTTGCC
TCACGCCTTTTCTTCAAAGCCAAAGAAGCTGGGATGATGAGCAGTGGATATGCATGGATC
ATCACAGATGTGCTAACGAGTCTTCTAGACTCGGTAGATCCTTCAGTGATTGAGTCATCA
ATGCAAGGTGTTCTTGGTGTAAAGCCTTACTTTCCAAGATCACATGAGCTTAACAATTTC
ACCAAGAGATGGAGAGAGAGATTTCGTCAAGAGTATCCAAACATGGACCAAGTTGAACTC
AATGTTTACGGGCTATGGGCATATGATAGCATTACCGTCTTAGCAAAAGCAGTACAGAAT
GTGGGCACAACTGCCATCCCAGAAGTCAAGAAACCAGACACTAAAGAGAACTTATCGGAC
TTAGATGCACTTGGAACCTCAGAATTGGGATCTTTGCTCATTGACACTCTGCAAAACACA
TCCCTAAAAAGAGGACTAAGTGGTGATTTCCGTATCATTGATGGAGAATTGCAGCCATCC
CCATATCAGATTGTGAACATAATTGGGAAAGGAGAGAGAAGCATTGGATTCTGGACAGAG
AGTGATGGAATTTCATATAAACTGACTATGAATGGGAAAACAGCTAATAGTAGTAATAAG
CAACTAGGTACCATCATTTGGCCGGGTGAATCGACTATTGTTCCGAGAGGCTGGGAGATG
CCCACAAGTGGGAAGAAGTTAAGGGTTGGAGTTCCTGTCAAAGGAGGCTTGGAGCAATTC
ATCAAAGTGGAAATAGATTCAAAAACACAAGCAGTAACTGCAACTGGTTTCTGTGCAGAT
GTCTTCAAAGAAGTCATCCAATCTTTGCCATTTGCTGTCCCGTACGAACTTATTCCATTT
CGAATACCAGATACCCTAACTCTTCCAGACTATGATGATCTTATTTACAAGATCTCTTCC
AAGGAATATGATGCAGTTATAGGTGATGTGACCATTTTAGCGAACCGATCCAAGTATGTG
GATTTCACATTACCTTTCACGGAGTCGGGTATTTCTGCAGTAGTGCCAGTAAGGGATGAT
GAGAGGAAGAATGCTTGGATTTTCTTGAAACCTCTAAAGACCGAACTTTGGATAACAACT
GGAGCATTCTTCGTCTTCATTGGTTTTGTGGTTTGGGTACTCGAGCATCGTGTAAACAAA
GAGTTTCGAGGACCCAAACACAAGCAAGTTGGGATGATATTCTGGTTTTCCTTCTCAACT
CTCGTTTTTGCACACAGAGAGAGGGTAACAAGCAACTTAACAAGATTCGTGATTATTGTG
TGGGTTTTCGTGGTGCTAGTACTGACATCAAGTTATACAGCCAACTTAACATCTATGTTA
ACAGTGCAACAGCTCCAACCTACTGTAACAAACCTCAATGATCTCATAACAAATGGAGAA
TATGTTGGGTACCAAGAAGGTTCCTTTGTCAAAGACGTCTTGAAGCGCATGAATTTTGAT
AGCTCCAAGTTTAAGAGTTATAGTACATTGGAAGAGTACAATGATGCCCTCTCAAGAGGA
AGTAAAAATGGGGGAGTTGGTGCAATTGTTGATGAACTACCTTATCTGAGACTTTTCCTC
AACAAGTACTGCAGGAAGTACATTATGGTCGGTCCAACTTACAAGGCTGCTGGCTTTGGA
TTCGCATTTCCAAAAGGATCTCCATTGGTACCTGACGTCTCGAGAGGAGTCCTAAAGGTG
ATGGAGGGAGAGTTTATGAATAACATAATACAGAAATGGTTTGGGAATGAAACAGATTGC
CCAGAGAAAGATGGAATGGCTATAACATCGGACAGCCTCACACTAGATAGTTTTAAGGGC
CTTTTCCTCATAGCTGGTGTATCAGCTGGTTCTGCTCTTCTCATATTCTTCCTCATCTTC
CTTTATCAGAATAGAGAAATCTTAGACACTGATGATTCAATATGGCAAAAGCTTTCTACA
ATAGCTAAAGTCTTTGATGAAGAGAAAGATAGCTCTAATTCTAAGTCAGAAATGCCAGAA
GACAATGAGAGCCAAACGGCTACACCTTTTGCAGCAAGTGCAGCTTCCCCTGAAATATTG
CTCCATCTTGCCTCGCAAAGCCCAGACATCAGAATTTCCGACAGCCTAGGAGCATCCCTT
ACAGAAGAAGGGTTTTCTACACCAGAACCTGGAACTCCAGTTCATGAAACCCTTATAGGG
ACAACCGAAGAGAGATGA

Peptide Sequence

PEP ID

XP_016474840.1
PEP Infomation

PREDICTED: glutamate receptor 2.8-like [Nicotiana tabacum]
Sequence

MQNQRCHFLILFIQFVSIISFCYHIMPIRGQDETNVIKKVDVGIILDLETNVAKVMHTCI
LLALEDYHAANRSAIRIVPHFRDSKKDDVEAASAAIYLLKDVKVQAIFGPQMSTQTDFVI
DIGNKVKVPVISPATSPSLSVKENPYFIRAALPSSSQTKAIAAIVKNYEWREVVIIYEDS
PFGTGIVPHLTDALLEISTLVSYRSVISPSANDDQILRELYKLNTMQTRVFIVHLQSFLA
SRLFFKAKEAGMMSSGYAWIITDVLTSLLDSVDPSVIESSMQGVLGVKPYFPRSHELNNF
TKRWRERFRQEYPNMDQVELNVYGLWAYDSITVLAKAVQNVGTTAIPEVKKPDTKENLSD
LDALGTSELGSLLIDTLQNTSLKRGLSGDFRIIDGELQPSPYQIVNIIGKGERSIGFWTE
SDGISYKLTMNGKTANSSNKQLGTIIWPGESTIVPRGWEMPTSGKKLRVGVPVKGGLEQF
IKVEIDSKTQAVTATGFCADVFKEVIQSLPFAVPYELIPFRIPDTLTLPDYDDLIYKISS
KEYDAVIGDVTILANRSKYVDFTLPFTESGISAVVPVRDDERKNAWIFLKPLKTELWITT
GAFFVFIGFVVWVLEHRVNKEFRGPKHKQVGMIFWFSFSTLVFAHRERVTSNLTRFVIIV
WVFVVLVLTSSYTANLTSMLTVQQLQPTVTNLNDLITNGEYVGYQEGSFVKDVLKRMNFD
SSKFKSYSTLEEYNDALSRGSKNGGVGAIVDELPYLRLFLNKYCRKYIMVGPTYKAAGFG
FAFPKGSPLVPDVSRGVLKVMEGEFMNNIIQKWFGNETDCPEKDGMAITSDSLTLDSFKG
LFLIAGVSAGSALLIFFLIFLYQNREILDTDDSIWQKLSTIAKVFDEEKDSSNSKSEMPE
DNESQTATPFAASAASPEILLHLASQSPDIRISDSLGASLTEEGFSTPEPGTPVHETLIG
TTEER

Transcript Sequence

Gene sequence data has not been registered.